← BioTransfer GEO Dataset Finder
GEO series

Effects of Candida spp. colonization in the gut for germ-free mice on colonic gene expression

GSE260652 Mus musculus Expression profiling by high throughput sequencing 8 samples Submitted 2025/03/01 Platform GPL17021
Summary
To investigate the changes in transcriptomic profiles of colonic samples by the colonization of two Candida spp. in the gut. Both species upregulate the pathways related to protein processing in the endoplasmic reticulum, antigen processing, and presentation. In addition, C. tropicalis enhances cell proliferation and cytokine-related genes.
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE260652_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1082892 and SRA study SRP493006. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 8 more — browse all 8 samples with per-sample file links →

Similar datasets

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.