Noncoding RNA, ncRNA-a3, epigenetically regulates TAL1 transcriptional program during erythropoiesis (ATAC-Seq)
ChIP-seq / ATAC-seq (genome binding and open chromatin) · human · 3 samples
- What it is
- ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
- Organism
- Homo sapiens (human)
- Samples
- 3 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Noncoding RNA, ncRNA-a3, Epigenetically Regulates TAL1 Transcriptional Program During ErythropoiesisMolecular and cellular biology · 2025
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE272338_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.
Also filed as BioProject PRJNA1136478 and SRA study SRP520235. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 3 more — browse all 3 samples with per-sample file links →
- GSE272339 Noncoding RNA, ncRNA-a3, epigenetically regulates TAL1 transcriptional program during erythropoiesis (CUT&Run) 15 samples shares ncrna-a3, tal1, epigenetically, erythropoiesis, noncoding, program
- GSE272341 Noncoding RNA, ncRNA-a3, epigenetically regulates TAL1 transcriptional program during erythropoiesis (RNA-Seq) 13 samples shares ncrna-a3, tal1, epigenetically, erythropoiesis, noncoding, program
- GSE272340 Noncoding RNA, ncRNA-a3, epigenetically regulates TAL1 transcriptional program during erythropoiesis (NG Capture-C) 3 samples shares ncrna-a3, tal1, epigenetically, erythropoiesis, noncoding, program
- GSE305788 Activation of OSM-STAT3 Epigenetically Regulates Tumor-Promoting Transcriptional Programs in Cervical Cancer [ATAC-Seq] 8 samples shares epigenetically, atac-seq, program
- GSE337275 Pioneer transcription factor TAL1 reshapes chromatin architecture to direct erythroid cell fate commitment [ATAC-Seq 2] 4 samples shares tal1, atac-seq
- GSE304981 Pioneer transcription factor TAL1 reshapes chromatin architecture to direct erythroid cell fate commitment [ATAC-Seq] 4 samples shares tal1, atac-seq
- GSE283793 BCL11A is required for normal erythropoiesis [ATAC-seq] 24 samples shares erythropoiesis, atac-seq
- GSE222296 Nuclear IDH1 regulates human erythropoiesis by eliciting chromatin state reprogramming 10 samples shares erythropoiesis, program
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.