Total Progesterone Receptor (TPR) ChIPseq in the mouse myometrium at various stages of pregnancy, labour, and postpartum.
ChIP-seq / ATAC-seq (genome binding and open chromatin) · mouse · 12 samples
- What it is
- ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
- Organism
- Mus musculus (mouse)
- Samples
- 12 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE291680_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.
Also filed as BioProject PRJNA1234646 and SRA study SRP569702. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 12 more — browse all 12 samples with per-sample file links →
- GSE292591 Progesterone receptor in uterine glands is required for pregnancy establishment in mice 4 samples shares progesterone, pregnancy, receptor
- GSE244841 Relaxin Attenuates the Genomic Actions and Biological Effects of Estrogens in the Myometrium by Reducing Estrogen Receptor Alpha Phosphorylation [ChIP-seq] 32 samples shares myometrium, receptor
- GSE288662 Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Multiomics] 20 samples shares progesterone, receptor
- GSE299175 Epas1 expression is controlled by the progesterone receptor and regulates hCG-induced gene expression in Granulosa Cells during ovulation in mice. 16 samples shares progesterone, receptor
- GSE289992 Persistent dopamine-dependent remodeling of the neural transcriptome in response to pregnancy and postpartum [snRNA-seq] 15 samples shares postpartum, pregnancy
- GSE298427 Progesterone receptor isoform PGR-A in female fertility 8 samples shares progesterone, receptor
- GSE244842 Relaxin Attenuates the Genomic Actions and Biological Effects of Estrogens in the Myometrium by Reducing Estrogen Receptor Alpha Phosphorylation [RNA-seq] 8 samples shares myometrium, receptor
- GSE252322 Endometrial zinc transporter Slc39a10/Zip10 is indispensable for progesterone responsiveness and successful pregnancy in mice 6 samples shares progesterone, pregnancy
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.