Transcriptional regulation of the main olfactory epithelium by environmental olfactory exposures
Single-cell RNA-seq · mouse · 34 samples
- What it is
- Single-cell RNA-seqGene activity measured in thousands of individual cells, so cell types can be told apart. Read from the summary: GEO's own type field only says 'expression profiling by sequencing', so confirm it in the paper.
- Organism
- Mus musculus (mouse)
- Samples
- 34 samples: 26 distinct titles, 8 of them repeatedGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Transcriptional regulation of the main olfactory epithelium by environmental olfactory exposuresScientific reports · 2026
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE327967_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Single-cell studies usually ship their counts as 10x files (matrix.mtx, barcodes.tsv, features.tsv), an .h5 file, or an .rds / .h5ad object that Seurat or Scanpy can open. Look for those among the supplementary files.
Also filed as BioProject PRJNA1453408 and SRA study SRP691725. Searching any of these in the dataset finder brings you back here.
How we read this: Read from 34 sample titles: 26 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM9669467 A1 Mouse1 left BC
- GSM9669468 B1 Mouse2 left BC
- GSM9669469 F5 Pool 2A
- GSM9669470 F6 pool 2A
- GSM9669471 F7 Pool 2A
- GSM9669472 F8 Pool 2A
- GSM9669473 F5 Pool 2B
- GSM9669474 F6 pool 2B
- GSM9669475 F7 Pool 2B
- GSM9669476 F8 Pool 2B
- GSM9669477 M1 Pool 1A
- GSM9669478 M2 Pool 1A
- GSM9669479 M3 Pool 1A
- GSM9669480 M4 Pool 1A
- GSM9669481 M1 Pool 1B
- GSM9669482 M2 Pool 1B
- GSM9669483 M3 Pool 1B
- GSM9669484 M4 Pool 1B
- GSM9669485 F9 Pool 1
- GSM9669486 F10 Pool 1
- GSM9669487 F11 Pool 1
- GSM9669488 F12 Pool 1
- GSM9669489 F9 Pool 2
- GSM9669490 F10 Pool 2
- GSM9669491 F11 Pool 2
- GSM9669492 F12 Pool 2
- GSM9669493 M13 Pool 1
- GSM9669494 M14 Pool 1
- GSM9669495 M15 Pool 1
- GSM9669496 M16 Pool 1
- GSM9669497 M13 Pool 2
- GSM9669498 M14 Pool 2
- GSM9669499 M15 Pool 2
- GSM9669500 M16 Pool 2
- GSE341251 Transcriptomic profiling of the main olfactory epithelium of the perinatal mouse 16 samples shares epithelium, olfactory, main
- GSE296360 pS6 immunoprecipitation RNA-seq of mouse olfactory epithelium in response to single odorants, binary mixtures, and complex fragrances 36 samples shares epithelium, olfactory
- GSE296359 Total RNA-seq of mouse olfactory epithelium in response to single odorants and binary mixtures 24 samples shares epithelium, olfactory
- GSE173999 Single-cel RNA-seq of Mouse Olfactory Epithelium for Understanding Age-associated Neuronal Injury Response 19 samples shares epithelium, olfactory
- GSE306619 pS6-IP RNA-seq of mouse olfactory epithelium upon binary odor mixture stimulation under different delivery methods 15 samples shares epithelium, olfactory
- GSE289162 Plasticity of epigenomic aging creates vulnerabilities to early-life environmental exposures, reshaping adult cell- and direction-specific trajectories 54 samples shares environmental, exposures
- GSE271029 Mex3a-dependent post-transcriptional silencing assures olfactory receptor diversity and axon guidance specificity [RNA-Seq] 46 samples shares olfactory
- GSE254669 RNA-Seq data of mouse retina, retinal pigment epithelium and cones 254 samples shares epithelium
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.