Formylpeptide Receptor Activation Attenuates Renovascular Remodeling in Neurogenic Hypertension (Left Ventricle)
RNA-seq (gene expression) · mouse · 26 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 26 samples: 26 samples, each with a distinct title — no replicated groupsGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE333586_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1471616 and SRA study SRP704438. Searching any of these in the dataset finder brings you back here.
Supports a case/control comparison: 12 samples read as cases, 14 as controls.
How we read this: Read from 26 sample titles: 26 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM9769552 BPH1000, BPH/2J, vehicle, LV
- GSM9769553 BPH962, BPH/2J, vehicle, LV
- GSM9769554 BPH964, BPH/2J, vehicle, LV
- GSM9769555 BPH966, BPH/2J, Cmpd17b-treated LV
- GSM9769556 BPH968, BPH/2J, Cmpd17b-treated LV
- GSM9769557 BPH970, BPH/2J, vehicle, LV
- GSM9769558 BPH972, BPH/2J, Cmpd17b-treated LV
- GSM9769559 BPH978, BPH/2J, Cmpd17b-treated LV
- GSM9769560 BPH980, BPH/2J, vehicle, LV
- GSM9769561 BPH982, BPH/2J, vehicle, LV
- GSM9769562 BPH984, BPH/2J, Cmpd17b-treated LV
- GSM9769563 BPH988, BPH/2J, vehicle, LV
- GSM9769564 BPH992, BPH/2J, Cmpd17b-treated LV
- GSM9769565 BPH996, BPH/2J, Cmpd17b-treated LV
- GSM9769566 BPN1001, BPN/3J, vehicle, LV
- GSM9769567 BPN1003, BPN/3J, vehicle, LV
- GSM9769568 BPN963, BPN/3J, vehicle, LV
- GSM9769569 BPN965, BPN/3J, Cmpd17b-treated LV
- GSM9769570 BPN967, BPN/3J, Cmpd17b-treated LV
- GSM9769571 BPN969, BPN/3J, vehicle, LV
- GSM9769572 BPN971, BPN/3J, Cmpd17b-treated LV
- GSM9769573 BPN973, BPN/3J, vehicle, LV
- GSM9769574 BPN975, BPN/3J, vehicle, LV
- GSM9769575 BPN979, BPN/3J, Cmpd17b-treated LV
- GSM9769576 BPN981, BPN/3J, vehicle, LV
- GSM9769577 BPN983, BPN/3J, Cmpd17b-treated LV
- GSE333587 Formylpeptide Receptor Activation Attenuates Renovascular Remodeling in Neurogenic Hypertension (Kidney) 19 samples shares formylpeptide, renovascular, hypertension, activation, attenuates, remodeling, neurogenic
- GSE319612 Rothia mucilaginosa Alleviates Constipation through Gut Microbiota Remodeling and Neuroactive Pathway Activation 26 samples shares activation, remodeling
- GSE327565 Sustained Yap/Taz activation promotes aberrant alveolar epithelial cell differentiation and drives persistent fibrotic remodeling 14 samples shares activation, remodeling
- GSE303181 STC-1 Attenuates Scar Formation via PI3K/AKT Pathway Activation and Immune Modulation 12 samples shares activation, attenuates
- GSE330351 Ferritin-mediated iron homeostasis regulates fibroblast activation and shapes post-infarction cardiac remodeling 9 samples shares activation, remodeling
- GSE266024 Nrf2-mediated chromatin activation of hyperosmotic response genes attenuates heat-induced renal injury 42 samples shares activation, attenuates
- GSE266022 Nrf2-mediated chromatin activation of hyperosmotic response genes attenuates heat-induced renal injury [ChIP-seq] 24 samples shares activation, attenuates
- GSE255212 Transcriptomic Signatures of WNT-Driven Pathways and Granulosa Cell-Oocyte Interaction during Primordial Follicle Activation 762 samples shares activation
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.