Colon tissue of Il10-/- mice monoassociated with Escherichia coli NC101 or NC101-delta-pks
Gene expression profiling · mouse · 8 samples
- What it is
- Gene expression profilingGene activity measured per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 8 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE39095_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA169937. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 8 more — browse all 8 samples with per-sample file links →
- GSE39092 Colon tissue of Il10-/- mice monoassociated with Escherichia coli NC101 or Escherichia faecalis OG1RF (PAMM-077 array) 12 samples shares nc101, il10, monoassociated, escherichia, colon, coli
- GSE39094 Colon tissue of Il10-/- mice monoassociated with Escherichia coli NC101 or Escherichia faecalis OG1RF (PAMM-073 array) 12 samples shares nc101, il10, monoassociated, escherichia, colon, coli
- GSE255423 Longitudinal scRNA-seq of murine Il10KO colitis 24 samples shares il10, coli
- GSE260595 Longitudinal bulk RNA-seq of murine Il10KO colitis 18 samples shares il10, coli
- GSE253945 Tissue RNAsSeq of germ-free IL10KO versus WT mice in the presence or absence of human gut microbes 108 samples shares il10
- GSE309404 Antagonizing Il10 and Il4 signaling via intracerebral decoy receptor expression attenuates Aβ accumulation 23 samples shares il10
- GSE287759 Role of IL10 signaling in the circadian control of host response to Influenza infection 20 samples shares il10
- GSE283286 Comparison of IL10-eGFP+ cells with IL10-eGFP- CD4+ T cells induced by in vivo immunisation 4 samples shares il10
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.