Gene expression profiling of oral and genital lichen planus epithelium and normal oral and genital epithelium
Expression microarray · human · 23 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 23 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE52130_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA226979. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 23 more — browse all 23 samples with per-sample file links →
- GSE303468 Transcrpitomic analysis of Oral lichen planus and oral lichenoid lesions 42 samples shares lichen, planus, oral
- GSE317789 Single-cell and spatial profiling reveal cDC2A-CXCL13+ CD8+ T-epithelial cell crosstalk and cytotoxicity through TNFRSF9 in cutaneous and mucosal lichen planus 42 samples shares lichen, planus
- GSE176492 Oral Epithelium Response of Electronic Cigarette Users to Electronic Cigarette 87 samples shares epithelium, oral
- GSE330022 Multidimensional Exposure Architecture Shapes Vaping-Associated Transcriptomic Dysregulation in Oral Epithelium 83 samples shares epithelium, oral
- GSE243940 Single cell profiling of lichen planus identifies type I interferon response and potential therapeutic targeting 9 samples shares lichen, planus
- GSE280583 bulk RNA-seq of lichen planus 49 samples shares lichen, planus
- GSE280584 scRNA of lichen planus 41 samples shares lichen, planus
- GSE254542 T-lymphocyte recruitment and retention in lichen planus 20 samples shares lichen, planus
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.