Expression data from skin biopsies in pateints with systemic sclerosis treated with anti-TGF-beta, fresolimumab
Expression microarray · human · 53 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 53 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE55036_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA238310. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 53 more — browse all 53 samples with per-sample file links →
- GSE267348 Deficiency of lymphatic ERG and FLI1 in systemic sclerosis is associated with rarefaction of skin blood and lymphatic vasculature 12 samples shares sclerosis, systemic, skin
- GSE130955 Global skin gene expression profile of early diffuse cutaneous systemic sclerosis shows a prominent innate and adaptive immunity profile 91 samples shares sclerosis, systemic, skin
- GSE285522 Bulk RNA sequencing of skin biopsies from psoriasis patients treated with Dead Sea climatotherapy 30 samples shares biopsies, treated, skin
- GSE292979 Characterisation of a pathogenic non-migratory fibroblast population in systemic sclerosis skin [scRNA-Seq] 15 samples shares sclerosis, systemic, skin
- GSE292702 Characterisation of a pathogenic non-migratory fibroblast population in systemic sclerosis skin 12 samples shares sclerosis, systemic, skin
- GSE311770 Minimally invasive 1 mm skin biopsies capture regional transcriptomic heterogeneity in vitiligo 105 samples shares biopsies, skin
- GSE295274 Cellular and molecular dysregulation of the esophageal epithelium in systemic sclerosis 37 samples shares sclerosis, systemic
- GSE244781 Molecular changes implicate angiogenesis and arterial remodeling in systemic sclerosis-associated and idiopathic pulmonary hypertension 33 samples shares sclerosis, systemic
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.