Molecular Criteria for Defining the Naive Human Pluripotent State [methylation profiling]

Direct links to NCBI, no account and no request form: the whole study as GSE85708_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 12 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA339143 and SRA study SRP085035. Searching any of these in the dataset finder brings you back here.

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 12 more — browse all 12 samples with per-sample file links →

• GSE79279 Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA 159 samples
• GSE79277 Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA [Plasma RRBS] 134 samples
• GSE310353 In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment 116 samples
• GSE330697 Delayed molecular aging, preservation of energy metabolism and enhanced exercise response in exercise-trained human muscle 93 samples
• GSE330130 A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS [snRNA-Seq; snATAC-Seq] 87 samples
• GSE25247 BI Human Reference Epigenome Mapping Project: Characterization of DNA methylation by RRBS in human subject 55 samples
• GSE54983 DNA methylation data from Reduced Representation Bisulphite sequencing in the Dutch Hunger Winter Families Study 48 samples
• GSE328275 Single-cell RNA sequencing of CD45+ immune cells across primary tumor, sentinel tumor-draining lymph node, and axillary lymph node in treatment-naive triple-negative breast cancer 28 samples

Search all human methylation datasets in GEO →