← BioTransfer GEO Dataset Finder
GEO series

TGFβ activation and inhibition of Wnt and MAPK signaling pathways promote the specification of joint lineage cells in vitro and ex vivo

GSE274060 Mus musculus Expression profiling by high throughput sequencing 9 samples Submitted 2025/09/22 Platform GPL24247
Summary
The developmental processes of synovial joint initiation and subsequent differentiation of progenitor cells towards anatomically and functionally distinct joint tissues are not well understood. Here we quantified the induction of cells expressing growth and differentiation factor 5 (Gdf5), an early marker of joint formation, and Prg4, a proteoglycan found in the superficial zone of articular cartilage and other joint tissues, utilizing a dual reporter mESC line and directed differentiation methodologies. We found TGF signaling to be necessary and sufficient for the induction of Gdf5-RFP and Prg4-GFP. Inhibition of either canonical Wnt signaling or MAPK signaling significantly increased the induction of Gdf5-RFP and chondrogenesis, while activation of either pathway prohibited this. Activation of MAPK significantly promoted the emergence of Prg4-GFP-expressing cells and elevated levels of tendon-ligament fibroblast genes such as Tnmd. We used single cell transcriptomics to determine the cellular composition of these cultures and determined that Gdf5+ cells are chondrogenic in both in vitro cultures and in mouse E12.5 and E14.5 limb bud cells. We validated the joint cell- promoting role of Wnt and MAPK inhibition in both systems. In summary, we used a novel ESC model to elucidate the roles of TGF, Wnt and MAPK signaling in the specification and differentiation of joint lineage cells.
Published in
The roles of TGF-β, Wnt, and MAPK signaling pathways in joint lineage specification in vitro and ex vivo
Raj S, Cutia T, Menghini S et al. · Stem cell reports 2025 · PMID 41135529 · doi:10.1016/j.stemcr.2025.102685
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE274060_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 9 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1144850 and SRA study SRP524488. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 9 more — browse all 9 samples with per-sample file links →

Similar datasets

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.