Inhibition of the fructose transporter Glut5 boosts androgen production by dysregulating the metabolism of murine Leydig cells
RNA-seq (gene expression) · mouse · 12 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 12 samples: 6 × mLTC-1 murine Leydig cell line, control, vs 6 × mLTC-1 murine Leydig cell line, 100µM MSNBA,Groups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE294305_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1248981 and SRA study SRP578106. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 12 samples.
How we read this: 2 replicated groups read from 12 sample titles; they account for 12 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM8902148 mLTC-1 murine Leydig cell line, control, replicate 1 mLTC-1 murine Leydig ce…
- GSM8902149 mLTC-1 murine Leydig cell line, control, replicate 2 mLTC-1 murine Leydig ce…
- GSM8902150 mLTC-1 murine Leydig cell line, 100µM MSNBA, replicate 1 mLTC-1 murine Leydig ce…
- GSM8902151 mLTC-1 murine Leydig cell line, control, replicate 3 mLTC-1 murine Leydig ce…
- GSM8902152 mLTC-1 murine Leydig cell line, control, replicate 4 mLTC-1 murine Leydig ce…
- GSM8902153 mLTC-1 murine Leydig cell line, 100µM MSNBA, replicate 2 mLTC-1 murine Leydig ce…
- GSM8902154 mLTC-1 murine Leydig cell line, control, replicate 5 mLTC-1 murine Leydig ce…
- GSM8902155 mLTC-1 murine Leydig cell line, 100µM MSNBA, replicate 3 mLTC-1 murine Leydig ce…
- GSM8902156 mLTC-1 murine Leydig cell line, 100µM MSNBA, replicate 4 mLTC-1 murine Leydig ce…
- GSM8902157 mLTC-1 murine Leydig cell line, control, replicate 6 mLTC-1 murine Leydig ce…
- GSM8902158 mLTC-1 murine Leydig cell line, 100µM MSNBA, replicate 5 mLTC-1 murine Leydig ce…
- GSM8902159 mLTC-1 murine Leydig cell line, 100µM MSNBA, replicate 6 mLTC-1 murine Leydig ce…
- GSE267276 FUS-mediated inhibition of myogenesis by suppressing TNNT1 production [RNA-seq] 12 samples shares inhibition, production
- GSE318028 Pharmacological inhibition of FKBP51 mitigates early life adversity-induced social deficits 246 samples shares inhibition
- GSE293819 Monitoring systemic immune responses to checkpoint inhibition in breast cancer reveals host responses and mechanisms of resistance 142 samples shares inhibition
- GSE307181 Sex specific correction of maternal inflammation-induced behavioral abnormalities by the inhibition of colony-stimulating factor 1 receptor 96 samples shares inhibition
- GSE235623 MERTK inhibition for the treatment of tissue fibrosis [RNA-seq] 86 samples shares inhibition
- GSE278534 EZHIP-mediated PRC2 inhibition is required to maintain H3K27me3-dependent imprinting post fertilization 76 samples shares inhibition
- GSE279388 Inactivation of Atp7b copper transporter in the intestinal epithelial cells is associated with altered lipid processing and cell growth machinery that are independent from hepatic copper accumulation and liver histology severity 76 samples shares transporter
- GSE313112 Inhibition of METTL3 by STC-15 induces RNA misprocessing that results in dsRNA formation and activates innate immunity [RNA-Seq MC38] 69 samples shares inhibition
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.