Caco-2 cells cultured in the presence of Lactobacillus fermentum strains AGR1485 or AGR1487
Expression microarray · human · 12 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 12 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE46352_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA200705. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 12 more — browse all 12 samples with per-sample file links →
- GSE290901 Transcriptomic Analysis of Caco-2 Cells Co-cultured with KERP2-related Entamoeba histolytica Strains 12 samples shares caco-2, cultured, strains
- GSE18372 Effect of Lactobacillus plantarum MB452 on the gene expression of the intestinal epithelial cell line Caco-2 8 samples shares caco-2, lactobacillus
- GSE104489 Dynamic Gene Network Analysis of Caco-2 Cell Response to Shiga Toxin-Producing Escherichia coli-Associated Hemolytic–Uremic Syndrome 25 samples shares caco-2
- GSE39740 Gene expression profile in Caco-2 cells infected with Japanese encephalitis virus 6 samples shares caco-2
- GSE328863 Comparative transcriptomic points of departure analysis of pesticides in human Caco-2 and Hep G2 cells. 960 samples shares caco-2
- GSE314628 Temporal Transcriptomic Profiling Identifies Core Regulators in Cytokine-Induced Gut Barrier Disruption in Differentiated Caco-2 Cells 73 samples shares caco-2
- GSE302559 Transcriptomic points of departure for 6PPD-Quinone derived from human Caco-2 and HepG2 cells 72 samples shares caco-2
- GSE276364 Comparison of iPSC-derived human intestinal epithelial cells with Caco-2 cells and human in vivo data after exposure to Lactiplantibacillus plantarum WCFS1 36 samples shares caco-2
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.