IgA impact on distal small intestine after colonization with B. thetaiotaomicron
Expression microarray · mouse · 9 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Mus musculus (mouse)
- Samples
- 9 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE9018_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA102509. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 9 more — browse all 9 samples with per-sample file links →
- GSE40821 Regulation of antibacterial defense in the small intestine by the nuclear bile acid receptor 6 samples shares intestine, small
- GSE255078 RNAseq of proximal small intestine scrapings of mice fed a galactose, glucose, or lactose-containing diet during postweaning 39 samples shares intestine, small
- GSE216972 Effect of stroke on the transcriptome in the small intestines 29 samples shares intestine, small
- GSE300043 The impact of high-cholesterol diet feeding on hepatic mRNA and small non-coding RNA profiles in mice 25 samples shares impact, small
- GSE216581 Effect of stroke on the transcriptome of epithelial cells in the small intestines 12 samples shares intestine, small
- GSE216971 Effect of stroke on the transcriptome of lamina propria macrophages in the small intestines 10 samples shares intestine, small
- GSE342329 Transcriptomic profiling of small intestine from irinotecan-treated wild-type and Gsdme-deficient mice 8 samples shares intestine, small
- GSE271146 Inflammation Impacts Androgen Receptor Signaling in Basal Prostate Stem Cells Through Interleukin 1 Receptor Antagonist 282 samples shares impact
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.