Target landscape
Open Targets · retrieved 2026-09-17 · weekly12 genes recurrently implicated in Merkel cell carcinoma, triaged for whether anything can actually be aimed at them. The zeros are the informative rows.
Of 12 recurrently implicated genes, 7 carry any drug at all. That is a statement about these 12 gene targets, not about the disease: Merkel cell carcinoma does have labelled therapy — 3 drugs, listed in the next section.
Two different questions
The table below asks what can be aimed at 12 recurrently implicated genes. That is narrower than what is approved for the disease, and narrower again than what Merkel cell carcinoma is actually treated with, which includes agents approved under broader indications. All three are on this page and they are kept apart deliberately.
| Gene | Drugs | Approval, and whether it reached this disease | Open Targets tractabilitycomputed from protein features and literature — a signal that a modality is worth trying, not evidence that it works | Cell therapy here |
|---|---|---|---|---|
| TP53 across cancers → | 8 | Phase 3Alrizomadlin, Cenersen, Contusugene Ladenovec, Eprenetapopt, Idasanutlin, Navtemadlin, Siremadlin, Teprasiran2 trials, none active | other clinical modality, protein degrader, small molecule | — |
| RB1 across cancers → | 0 | No drug— | protein degrader, small molecule | — |
| CD274 across cancers → | 13 | 5 approvedAtezolizumab, Avelumab, Cosibelimab, Durvalumab, SugemalimabApproved in Merkel cell carcinoma: Avelumab.14 active of 45 Merkel cell carcinoma trials | antibody, other clinical modality, protein degrader, small molecule | 0 active of 2 trials |
| PDCD1 across cancers → | 26 | 9 approvedCemiplimab, Dostarlimab, Nivolumab, Pembrolizumab, Retifanlimab, Serplulimab, Sintilimab, Tislelizumab, ToripalimabApproved in Merkel cell carcinoma: Pembrolizumab, Retifanlimab.33 active of 77 Merkel cell carcinoma trials | antibody, other clinical modality, protein degrader, small molecule | 0 active of 2 trials |
| PIK3CA across cancers → | 31 | 3 approvedAlpelisib, Copanlisib, InavolisibApproved in breast cancer, breast neoplasm, breast carcinoma and 3 other indications. No Merkel cell carcinoma indication appears on these drugs’ labels.No Merkel cell carcinoma trial of any of these drugs | antibody, protein degrader, small molecule | — |
| NOTCH1 across cancers → | 1 | Phase 1BrontictuzumabNo Merkel cell carcinoma trial of any of these drugs | antibody, protein degrader, small molecule | — |
| KMT2D across cancers → | 0 | No drug— | antibody, protein degrader, small molecule | — |
| MYCL across cancers → | 0 | No drug— | — | — |
| ATOH1 | 0 | No drug— | — | — |
| SOX2 across cancers → | 0 | No drug— | protein degrader, small molecule | — |
| NCAM1 | 2 | Phase 2Lorvotuzumab Mertansine, Oncolysin S1 trials, none active | antibody, other clinical modality, protein degrader, small molecule | — |
| LAG3 across cancers → | 6 | 1 approvedRelatlimabApproved in melanoma. No Merkel cell carcinoma indication appears on these drugs’ labels.2 active of 2 Merkel cell carcinoma trials | antibody, other clinical modality | — |
Dataset evidence counts studies in the 53-study ranked set whose title or abstract names the gene; the bar is scaled to SOX2. Sources: Open Targets Platform and NCBI GEO, retrieved 2026-09-17. Clinical stage is the highest reached for any indication — see the per-drug indications noted in each row. Target-prioritisation reference only; not clinical or prescribing guidance.
What is actually approved here
openFDA drug labels · weekly3 drugs carry an FDA label naming Merkel cell carcinoma: Avelumab, Pembrolizumab, Retifanlimab. Separately, 15 of the drugs returned for the genes in the table above are approved only for other diseases and reach Merkel cell carcinoma through trials, not through their labels.
Every label that names Merkel cell carcinoma
| Drug | Role | What the label says |
|---|---|---|
| AvelumabBAVENCIO | Labelled here | Metastatic Merkel Cell Carcinoma BAVENCIO (avelumab) is indicated for the treatment of adults and pediatric patients 12 years and older with metastatic Merkel cell carcinoma (MCC) [see Clinical Studies |
| PembrolizumabKEYTRUDA, KEYTRUDA QLEX | Labelled here | Merkel Cell Carcinoma (MCC) for the treatment of adult and pediatric patients with recurrent locally advanced or metastatic Merkel cell carcinoma. |
| RetifanlimabZYNYZ | Labelled here | Merkel Cell Carcinoma (MCC) for the treatment of adult patients with metastatic or recurrent locally advanced Merkel cell carcinoma (MCC). |
4 labels match indications_and_usage:"Merkel cell carcinoma"; they collapse to 3 distinct molecules once salt forms, biosimilars and co-formulated hyaluronidase are merged. Source: openFDA drug label API (api.fda.gov/drug/label.json), retrieved 2026-09-17. Labels change; this reflects the current label text, not the approval history. Not prescribing guidance.
Cell therapy against polyomavirus T antigen
ClinicalTrials.gov · retrieved 2026-09-17 · weeklypolyomavirus T antigen is the busiest cell-therapy antigen in Merkel cell carcinoma: 4 registered trials, 1 still active.
| Trial | Phase | Status | Title | Last update |
|---|---|---|---|---|
| NCT05592626 | 1/2 | Recruiting | A Study of a Selective T Cell Receptor (TCR) Targeting, Bifunctional Antibody-fusion Molecule STAR0602 in Participants With Advanced Solid Tumors | 2026-08-11 |
| NCT01758458 | 1/2 | Terminated | Viral Oncoprotein Targeted Autologous T Cell Therapy for Merkel Cell Carcinoma | 2017-04-19 |
| NCT02584829 | 1/2 | Terminated | Localized Radiation Therapy or Recombinant Interferon Beta and Avelumab With or Without Cellular Adoptive Immunotherapy in Treating Patients With Metastatic Merkel Cell Carcinoma | 2022-03-22 |
| NCT03747484 | 1/2 | Terminated | Gene-Modified Immune Cells (FH-MCVA2TCR) in Treating Patients With Metastatic or Unresectable Merkel Cell Cancer | 2025-03-06 |
4 of 4 shown, most recently active first. Other antigens searched: PD-L1 (2), PD-1 (2). Source: ClinicalTrials.gov API v2, retrieved 2026-09-17. Trials are matched on the antigen named in the title or intervention, so a trial stating only a product code is missed.
Research momentum
PubMed MeSH · monthlyEvery term below is a share of the Merkel cell carcinoma literature, not a count, because the field itself grew: 2015–2018 (n=507) against 2021–2025 (n=671). A topic whose papers doubled while the field doubled has not risen.
Rising, with a real baseline
| MeSH term | 2015–18 | 2021–25 | Change | Share now |
|---|---|---|---|---|
| SEER Program | 1.38% | 3.58% | 2.59× | 24 papers |
| CD8-Positive T-Lymphocytes | 0.99% | 2.53% | 2.57× | 17 papers |
| Tumor Microenvironment | 1.58% | 3.13% | 1.98× | 21 papers |
| Transcription Factors | 0.99% | 1.79% | 1.81× | 12 papers |
| Lymphocytes, Tumor-Infiltrating | 1.18% | 1.94% | 1.64× | 13 papers |
| Immunotherapy | 5.13% | 6.26% | 1.22× | 42 papers |
| Antigens, Viral, Tumor | 4.34% | 5.22% | 1.2× | 35 papers |
| Margins of Excision | 1.78% | 2.09% | 1.18× | 14 papers |
| Antibodies, Monoclonal, Humanized | 6.51% | 7.6% | 1.17× | 51 papers |
| Skin Neoplasms | 83.04% | 96.27% | 1.16× | 646 papers |
Cooling
| MeSH term | 2015–18 | 2021–25 | Change | Share now |
|---|---|---|---|---|
| Treatment Outcome | 14.4% | 4.62% | 0.32× | 31 papers |
| Antineoplastic Agents | 5.33% | 1.79% | 0.34× | 12 papers |
| Diagnosis, Differential | 5.72% | 2.09% | 0.36× | 14 papers |
| Disease-Free Survival | 4.93% | 1.79% | 0.36× | 12 papers |
| Head and Neck Neoplasms | 4.73% | 2.09% | 0.44× | 14 papers |
| Immunohistochemistry | 12.23% | 5.51% | 0.45× | 37 papers |
Biggest topics now
| MeSH term | 2015–18 | 2021–25 | Change | Share now |
|---|---|---|---|---|
| Skin Neoplasms | 83.04% | 96.27% | 1.16× | 646 papers |
| Merkel cell polyomavirus | 20.51% | 22.65% | 1.1× | 152 papers |
| Prognosis | 15.38% | 16.1% | 1.05× | 108 papers |
| Polyomavirus Infections | 12.23% | 13.71% | 1.12× | 92 papers |
| Neoplasm Staging | 14.99% | 12.97% | 0.86× | 87 papers |
| Neoplasm Recurrence, Local | 9.47% | 10.58% | 1.12× | 71 papers |
| Tumor Virus Infections | 11.64% | 10.28% | 0.88× | 69 papers |
| Biomarkers, Tumor | 14.0% | 8.79% | 0.63× | 59 papers |
| Immune Checkpoint Inhibitors | 0.0% | 8.49% | 84948.84× | 57 papers |
| Antibodies, Monoclonal, Humanized | 6.51% | 7.6% | 1.17× | 51 papers |
Publication mix
| Type | 2015–18 | 2021–25 |
|---|---|---|
| Randomized Controlled Trial | 0.0% | 0.1% |
| Review | 14.8% | 10.9% |
| Meta-Analysis | 0.2% | 0.7% |
| Case Reports | 0.0% | 3.1% |
Query: Carcinoma, Merkel Cell[MeSH Major Topic] NOT ("Melanoma"[MeSH] OR "Carcinoma, Squamous Cell"[MeSH] OR "Basal Cell Carcinoma"[MeSH] OR "Small Cell Lung Carcinoma"[MeSH]). Terms need at least 12 papers in the recent window and, in the rising table, at least 5 in the earlier one — a term going from 1 paper to 12 is a large fold change and no evidence of anything. Ubiquitous descriptors (Humans, Animals, age bands) and the disease’s own term are dropped. Source: PubMed MeSH, retrieved 2026-09-17.
Disease burden
What the public sources count, and how closely each category matches this disease. The same figures for every disease on the site are on one table.
| Measure | Value | Match | What it counts |
|---|---|---|---|
| New cases each year | 3,000 cases/year | direct | American Cancer Society, Key Statistics for Merkel Cell Carcinoma, retrieved 2026-09-17 |
| Deaths each year | — | not published | Not published on the page. |
| Five-year relative survival | — | not published | The American Cancer Society publishes five-year relative survival by SEER stage, not one figure. |
| Median age at diagnosis | — | not published | Not published as a median: "Most Americans diagnosed with Merkel cell carcinoma are older than age 70." |
Years of life lost: not computed. Years of life lost needs survival, age at diagnosis and a case count. five_year_relative_survival, median_age_at_diagnosis is not recorded for this disease.
Funding
NIH RePORTER · quarterlyNIH obligations naming Merkel cell carcinoma, after removing the 213 records across all years that matched the search but are about something else. That filter is not cosmetic: without it this section reports another field’s funding as this disease’s.
NIH obligations by fiscal year
| Year | Obligations | Awards | Distinct projects | Dropped as off-topic |
|---|---|---|---|---|
| FY2013 | $7.8M | 15 | 15 | 10 |
| FY2014 | $8.2M | 16 | 16 | 14 |
| FY2015 | $5.2M | 17 | 16 | 13 |
| FY2016 | $4.5M | 12 | 11 | 12 |
| FY2017 | $5.6M | 13 | 12 | 18 |
| FY2018 | $5.1M | 10 | 9 | 22 |
| FY2019 | $13.5M | 21 | 14 | 18 |
| FY2020 | $10.5M | 20 | 13 | 16 |
| FY2021 | $10.7M | 20 | 13 | 18 |
| FY2022 | $11.1M | 20 | 14 | 16 |
| FY2023 | $13.5M | 25 | 17 | 19 |
| FY2024 | $14.5M | 25 | 24 | 15 |
| FY2025 | $15.9M | 28 | 21 | 22 |
Where FY2025 money went
| Institution | Obligations | Awards |
|---|---|---|
| University Of Washington | $5.7M | 7 |
| University Of Pennsylvania | $3.8M | 4 |
| National Institute Of Arthritis And Musculoskeletal And Skin Diseases | $1.7M | 2 |
| University Of Pittsburgh At Pittsburgh | $1.4M | 2 |
| Dana-Farber Cancer Inst | $1.3M | 2 |
| Stetson University | $0.5M | 1 |
| Southern California Inst For Res/Educ | $0.4M | 1 |
| University Of Michigan At Ann Arbor | $0.4M | 1 |
| University Of Arizona | $0.3M | 1 |
| University Of New Hampshire | $0.2M | 0 |
Text search Merkel cell carcinoma over project title, terms and abstract, per fiscal year. Awards are individual funding actions; distinct projects collapse them by core project number, so a multi-year grant counts once. The most recent year may be incomplete. Source: NIH RePORTER, retrieved 2026-09-17.
Who funds it, FY2025
The total says how much. These say who from, through what kind of award, and to whom — which a dollar figure cannot.
NIH institutes
Projects by administering institute. The rows above are the top 5 and account for 28 of 28.
Award mechanisms
R01 is an investigator-initiated grant; ZIA is NIH intramural, meaning the work happens inside NIH rather than being funded outside it. The rows above are the top 9 and account for 28 of 28.
Where it lands
Share of $15.9M in FY2025. The top three hold 70%.
Public datasets, ranked
NCBI GEO + Europe PMC + iCite · weekly103 human GEO series match Merkel cell carcinoma. Keyword relevance cannot tell a 276-sample patient cohort from a six-well cell-line experiment, so this ranking scores four things GEO does not expose: how often the accession is named in full-text papers, field-normalised citation impact, clinical annotation, and cohort type.
Composition of the 53-study ranked set
Established
high reuse, older| Accession | Study | Samples | MentionsEurope PMC | RCR | Evidence |
|---|---|---|---|---|---|
| GSE117988 | scRNAseq reveals mechanisms of Merkel cell carcinoma acquired immunotherapy resistance [1]2018 · single-cell | 6 | 19 | 6.5 | patient cohortAPT 0.95molecularCTLA4MCPYVPOLYOMAVIRUS248 cites |
| GSE39612 | Distinct gene expression profiles of viral- and non-viral associated Merkel cell carcinoma revealed by transcriptome analysis2012 · array | 138 | 25 | 3.1 | APT 0.75molecularMCPYVPOLYOMAVIRUSRB1101 cites |
| GSE22396 | Gene expression analysis of Merkel Cell Carcinoma2010 · array | 35 | 9 | 6.1 | APT 0.75survivalmolecularPOLYOMAVIRUS240 cites |
| GSE141121 | PD-1 and TIGIT co-expression identifies a circulating CD8 T cell population predictive of response to anti-PD-1 therapy in melanoma and Merkel-cell carcinoma patients2020 · sequencing | 276 | 1 | 2.1 | patient cohortAPT 0.75molecularPD-166 cites |
| GSE154938 | Glucose-6-Phosphate Dehydrogenase as a Prognostic Predictor Correlates with the Tumor Immune Activity Including Programmed Death Ligand-1 Expression in Merkel Cell Carcinoma2020 · sequencing | 41 | 2 | 1.7 | patient cohortAPT 0.25survivalstagemolecularPD-L125 cites |
| GSE79968 | Merkel cell polyomavirus small T antigen promotes pro-glycolytic metabolic perturbations required for transformation2016 · sequencing | 78 | 3 | 2.2 | cell lineAPT 0.25molecularMCPYVMYCLPOLYOMAVIRUS68 cites |
| GSE50451 | Microarray analysis of Merkel cell carcinoma (MCC) tumors, small cell lung cancer (SCLC) tumors, and MCC cell lines2014 · array | 77 | 10 | 1.7 | mixedAPT 0.258 cites |
| GSE69878 | MCPyV ST activates Max target genes by recruiting TRRAP/EP400 complex2017 · chromatin | 31 | 2 | 3.6 | APT 0.25molecularMCPYV112 cites |
Recent
2022 onward, by score| Accession | Study | Samples | MentionsEurope PMC | RCR | Evidence |
|---|---|---|---|---|---|
| GSE227708 | Cancer-specific CD8 T cell frequency at baseline in blood correlates with response to PD-1 blockade in Merkel cell carcinoma.2023 · single-cell | 16 | 4 | 2.8 | patient cohortAPT 0.75molecularMCPYVPD-1POLYOMAVIRUS25 cites |
| GSE226438 | Single cell RNA-seq profiling of patient-derived Merkel cell carcinoma tumor samples2023 · single-cell | 11 | 6 | 1.8 | patient cohortAPT 0.25survivalmolecularMCPYVPOLYOMAVIRUS20 cites |
| GSE235093 | Pre-existing skin-resident CD8 and γδ T cell circuits mediate immune response in Merkel cell carcinoma and Predict immunotherapy efficacy2024 · sequencing | 333 | 3 | 2.2 | APT 0.7522 cites |
| GSE261681 | Interlocking core regulatory circuits enable viral hijacking in Merkel cell carcinoma2025 · chromatin | 43 | 1 | 1.4 | APT 0.25molecularATOH1MCPYVPOLYOMAVIRUS5 cites |
| GSE281260 | Spatially organized inflammatory myeloid-CD8+ T cell aggregates linked to Merkel-cell Polyomavirus driven Reorganization of the Tumor Microenvironment2024 · single-cell | 146 | 1 | — | patient cohortsurvivalmolecularMCPYVPOLYOMAVIRUS |
| GSE292992 | MDM2 degradation overcomes feedback regulation of p53 signaling in Merkel cell carcinoma2026 · sequencing | 66 | 1 | — | mixedAPT 0.05stagemolecularMYCLPOLYOMAVIRUSTP531 cites |
Sources: NCBI GEO + Europe PMC + iCite, retrieved 2026-09-17. SubSeries are collapsed to one row per study by linked PMID. Of 103 series retrieved, 0 were dropped by the profile’s exclusion rules and 13 named the disease only in passing. The ranked set is a relevance-ranked sample, not a census, so the composition figures describe the sample only.
Where the gaps are
Derived from the sections above · recomputed on every refreshEach card below is a disagreement between two of the tables on this page — a drug that exists but was never tried here, a target that looks tested and was not, a gene with no drug whose product has a busy clinical programme. They are computed from the same facts as the tables, so they cannot contradict them.
RB1
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
PIK3CA
3 approved drugs (Alpelisib, Copanlisib, Inavolisib) and no registered trial in Merkel cell carcinoma. The molecules exist; nobody has tested them here.
KMT2D
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
MYCL
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
ATOH1
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
SOX2
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
How a machine reads this page
StaticThis page is written to be quoted correctly by a model as much as read by a person. The same facts are available as JSON at the sibling URL below, which is what to cite. The cross-disease layer — burden, genes, drugs and antigens across every briefing — is described at /disease/api.json.
Fully server-rendered
Every figure is in the HTML at first byte. No JavaScript runs, no figure is fetched after load, and nothing on this page requires a renderer to see.
Every number carries a source
Each section names the API it came from and the date it was retrieved: Open Targets (2026-09-17), ClinicalTrials.gov (2026-09-17), openFDA (2026-09-17), NCBI GEO (2026-09-17), PubMed (2026-09-17), NIH RePORTER (2026-09-17).
Negatives stated explicitly
Where nothing exists for Merkel cell carcinoma — no drug, no trial, no approval — the page says so in those words rather than omitting the row. An absent row is unquotable; a stated negative is the finding.
Denominators, not just percentages
Every share is printed with the count and the total it came from, so a figure can be checked rather than taken.
The filters are published
5 exclusion patterns are applied to free text before anything is ranked, because MKL-1 (a name that is also a gene) is used as a model system in "MKL1" is the transcription coactivator MRTF-A in most of its papers. What was removed and why is stated in each section rather than silently applied.
{
"disease": "Merkel cell carcinoma",
"mesh": "Carcinoma, Merkel Cell",
"facts": "https://usebiotransfer.org/disease/merkel-cell-carcinoma.json",
"methods": "https://usebiotransfer.org/methods/",
"all_diseases": "https://usebiotransfer.org/disease/api.json",
"note": "Every figure on the page is in that JSON with its source and retrieval date. Quote from it rather than from the HTML."
}