Resolvin E1/ChemR23 Protects Against Hypertension and Vascular Remodeling in Angiotensin II-Induced Hypertensive Mice
RNA-seq (gene expression) · mouse · 15 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 15 samples: 5 × Sham vs 5 × AngII vs 5 × AngII+E1Groups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE283472_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1194022 and SRA study SRP549295. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 15 samples.
How we read this: 3 replicated groups read from 15 sample titles; they account for 15 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM8663053 Sham_1 Sham
- GSM8663054 Sham_2 Sham
- GSM8663055 Sham_3 Sham
- GSM8663056 Sham_4 Sham
- GSM8663057 Sham_5 Sham
- GSM8663058 AngII_1 AngII
- GSM8663059 AngII_2 AngII
- GSM8663060 AngII_3 AngII
- GSM8663061 AngII_4 AngII
- GSM8663062 AngII_5 AngII
- GSM8663063 AngII+E1_1 AngII+E1
- GSM8663064 AngII+E1_2 AngII+E1
- GSM8663065 AngII+E1_3 AngII+E1
- GSM8663066 AngII+E1_4 AngII+E1
- GSM8663067 AngII+E1_5 AngII+E1
- GSE285383 CCL5 promotes angiotensin II-induced cardiac remodeling through regulation of platelet-driven M2 macrophage polarization 12 samples shares angiotensin, remodeling, ii-induced
- GSE279358 JOSD2 inhibits angiotensin II-induced vascular remodeling by deubiquitinating and stabilizing SMAD7 6 samples shares angiotensin, remodeling, ii-induced
- GSE284286 Cardiomyocyte-specific LARP6 overexpression prevents Angiotensin II-induced myocardial dysfunction and interstitial fibrosis 50 samples shares angiotensin, ii-induced
- GSE338380 Hepatocyte angiotensinogen deletion protects against Western diet-induced adiposity and hepatic steatosis under thermoneutral housing 48 samples shares angiotensin, protects
- GSE333586 Formylpeptide Receptor Activation Attenuates Renovascular Remodeling in Neurogenic Hypertension (Left Ventricle) 26 samples shares hypertension, remodeling
- GSE333587 Formylpeptide Receptor Activation Attenuates Renovascular Remodeling in Neurogenic Hypertension (Kidney) 19 samples shares hypertension, remodeling
- GSE337111 Gene expression changes in ventricular tissues were identified through RNA sequencing analysis of a mouse model of cardiac hypertrophic remodeling induced by angiotensin II (Ang II) 12 samples shares angiotensin, remodeling
- GSE239620 Single-cell RNA sequencing analysis of Angiotensin II-induced mouse dissecting AAA samples 9 samples shares angiotensin, ii-induced
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.