Vasculogenic tissue nanotransfection accelerates functional recovery after peripheral nerve injury
RNA-seq (gene expression) · mouse · 16 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 16 samples: 4 × Sham vs 4 × EFF111 vs 4 × EFF112 vs 4 × NaïveGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Vasculogenic tissue nanotransfection accelerates functional recovery after peripheral nerve injuryScience advances · 2026
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE317915_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1415809 and SRA study SRP669117. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 16 samples.
How we read this: 4 replicated groups read from 16 sample titles; they account for 16 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM9482798 Sham_1 Sham
- GSM9482799 Sham_2 Sham
- GSM9482800 Sham_3 Sham
- GSM9482801 Sham_4 Sham
- GSM9482802 EFF111_1 EFF111
- GSM9482803 EFF111_2 EFF111
- GSM9482804 EFF111_3 EFF111
- GSM9482805 EFF111_4 EFF111
- GSM9482806 EFF112_1 EFF112
- GSM9482807 EFF112_2 EFF112
- GSM9482808 EFF112_3 EFF112
- GSM9482809 EFF112_4 EFF112
- GSM9482810 Naïve_1 Naïve
- GSM9482811 Naïve_2 Naïve
- GSM9482812 Naïve_3 Naïve
- GSM9482813 Naïve_4 Naïve
- GSE319284 Vasculogenic tissue nanotransfection accelerates functional recovery after peripheral nerve injury 18 samples shares nanotransfection, vasculogenic, accelerates, peripheral, recovery, injury, nerve
- GSE319328 Vasculogenic tissue nanotransfection accelerates functional recovery after peripheral nerve injury 16 samples shares nanotransfection, vasculogenic, accelerates, peripheral, recovery, injury, nerve
- GSE273220 Peripheral nerve injury induces dystonia-like movements and dysregulation in the energy metabolism: A multi-omics descriptive study in Thap1+/− mice 72 samples shares peripheral, injury, nerve
- GSE241361 Sigma-1 Receptors Control Neuropathic Pain and Peripheral Neuroinflammation After Nerve Injury in Female Mice: A Transcriptomic Study 36 samples shares peripheral, injury, nerve
- GSE312514 Acutely denervated muscle EVs reshape neuronal mitochondrial metabolism via retrograde signaling to rescue peripheral nerve injury 24 samples shares peripheral, injury, nerve
- GSE269326 Nucleus Accumbens MEF2C Mediates the Maintenance of Peripheral Nerve Injury-induced Physiological and Behavioral Maladaptations 24 samples shares peripheral, injury, nerve
- GSE249114 TFEB/3 govern repair Schwann cell generation and function following peripheral nerve injury 12 samples shares peripheral, injury, nerve
- GSE172064 Comparing axon regeneration in male and female mice after peripheral nerve injury 12 samples shares peripheral, injury, nerve
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.